Annotation Overview for fig|257310.1.peg.4378 in Bordetella bronchiseptica RB50:
Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
| current assignment | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | EC Number | 1.1.1.25 | ||
|---|---|---|---|---|---|
| taxonomy id | 257310 | contig | |||
| internal links | genome browser | feature evidence | sequence | ACH [?] | show essentially identical genes | ||
| annotation history | run tool | ||||
| FigFam | FIG000022 | comment | AroDI alpha | ||
| data base cross references (dbxref) | |||||
This feature is part of a subsystem
Reasons for Current Assignment
We have assigned the function "Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) # AroDI alpha" to the
encoded protein. The protein occurs in 2 subsystems: "Chorismate Synthesis", and "Common Pathway
For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)". In "Chorismate Synthesis", it
appears to play a functional role that we have not associated with any other gene. In "Common
Pathway For Synthesis of Aromatic Compounds (DAHP synthase to chorismate)", it appears to play a
functional role that we have not associated with any other gene. The function of genes having the
same functional roles have been described in Haemophilus influenzae (12837789). This is a homologous protein which implements the same function.
Compare Regions
The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.
